Do custom-queue-list definitions apply to Frame-Relay subinterfaces. I liked to configure something like that:
<p>
interface Serial1/0.4 point-to-point
<p>ip address 10.1.1.5 255.255.255.0
<p>frame-relay class test
<p>frame-relay interface-dlci 54
<p>map-class frame-relay test
<p>no frame-relay adaptive-shaping
<p>frame-relay custom-queue-list 1
<p>queue-list 1 protocol ip 1 list 100
<p>queue-list 2 protocol ip 2 list 101
<p>queue-list 1 default 3
<p>queue-list 1 queue 1 byte-count 2048
<p>queue-list 1 queue 2 byte-count 1024
<p>queue-list 1 queue 3 byte-count 512
<p>
We have more than one subinterface on a frame-relay link. On one we like to do traffic management on the others not.