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It looks like the documentation has changed when it comes to patching ISE if you are running 3.4 or 3.5. Check the link below, section "Split Patch Install via GUI"https://community.cisco.com/t5/security-knowledge-base/cisco-ise-comprehensive-upgrade...
I had the same issue, called tac and this how we fix it: Its possible you are experiencing the following defect: https://cdetsng.cisco.com/summary/#/defect/CSCwa89534 Please perform the following workaround on the FMC cli and let me know if this res...