Check where you specify the initial config for the devices in NSO. Perhaps you have some stray xml file in your CDB directory, that has this wrong config? Or perhaps you already have some pre-existing config in NSO's CDB?
You can generate the appropriate initial config for your netsim devices using the command
ncs-netsim --dir <NetsimDir> ncs-xml-init > netsim_devices_init.xml
You can put this xml file in your CDB directory, so that when NSO starts, the correct config for the netsim devices will be loaded.
Note that this will help only if you start with an empty CDB for NSO. If there is already an existing CDB, the config in the xml files will not be loaded. Then you will have to manually load that config, using ncs_cmd or in ncs_cli, for example.