Hello Alper,
can you provide a network diagram explaining how the different devices are inter connected and in which Vlan(s) they speak OSPF.
You have made a note that you are using MST . Is the new C9300 configured for MST with the same parameters (region name, revision number, Vlans to MST instances mapping) ?
How is the C9300 connected to the N7k devices ? Are you using a vPC on the two N7k towards the C9300 ?
It is likely that the new device is introducing instability at STP level this makes IP connectivity intermittent and you get OSPF neighborships that fall down for expired dead intervals.
If there are temporary loops multicast and broadcast storms can happen.
It is difficult to say more.
Hope to help
Giuseppe